Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cd40lgP27548 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cd40lgP27548 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.5□□□□□ -0.57
Cd40lgP27548 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cd40lgP27548 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cd40lgP27548 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cd40lgP27548 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Gm8738-201ENSMUST00000172606 329 ntBASIC11.49□□□□□ -0.57
Cd40lgP27548 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.49□□□□□ -0.57
Cd40lgP27548 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.49□□□□□ -0.57
Cd40lgP27548 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Gm18935-201ENSMUST00000212692 664 ntBASIC11.49□□□□□ -0.57
Cd40lgP27548 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.49□□□□□ -0.57
Cd40lgP27548 Gm10608-202ENSMUST00000213924 676 ntBASIC11.49□□□□□ -0.57
Cd40lgP27548 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.49□□□□□ -0.57
Cd40lgP27548 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cd40lgP27548 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cd40lgP27548 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.49□□□□□ -0.57
Cd40lgP27548 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.49□□□□□ -0.57
Cd40lgP27548 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cd40lgP27548 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.49□□□□□ -0.57
Cd40lgP27548 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cd40lgP27548 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cd40lgP27548 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cd40lgP27548 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cd40lgP27548 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Cd40lgP27548 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cd40lgP27548 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.48□□□□□ -0.57
Cd40lgP27548 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cd40lgP27548 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cd40lgP27548 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cd40lgP27548 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cd40lgP27548 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cd40lgP27548 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cd40lgP27548 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.48□□□□□ -0.57
Cd40lgP27548 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cd40lgP27548 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cd40lgP27548 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cd40lgP27548 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cd40lgP27548 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.48□□□□□ -0.57
Cd40lgP27548 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.48□□□□□ -0.57
Cd40lgP27548 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.48□□□□□ -0.57
Cd40lgP27548 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cd40lgP27548 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Cd40lgP27548 Gm19309-201ENSMUST00000218295 205 ntBASIC11.48□□□□□ -0.57
Cd40lgP27548 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.48□□□□□ -0.57
Cd40lgP27548 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.48□□□□□ -0.57
Cd40lgP27548 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cd40lgP27548 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cd40lgP27548 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cd40lgP27548 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cd40lgP27548 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cd40lgP27548 Gm24526-201ENSMUST00000082921 158 ntBASIC11.48□□□□□ -0.57
Cd40lgP27548 Mir339-201ENSMUST00000083659 96 ntBASIC11.48□□□□□ -0.57
Cd40lgP27548 Olfr582-201ENSMUST00000098212 960 ntBASIC11.48□□□□□ -0.57
Cd40lgP27548 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cd40lgP27548 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Cd40lgP27548 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cd40lgP27548 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cd40lgP27548 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cd40lgP27548 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cd40lgP27548 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.48□□□□□ -0.57
Cd40lgP27548 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cd40lgP27548 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cd40lgP27548 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cd40lgP27548 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cd40lgP27548 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms