Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a2P25318 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a2P25318 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a2P25318 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a2P25318 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Col8a2P25318 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.34□□□□□ -0.75
Col8a2P25318 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a2P25318 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Col8a2P25318 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a2P25318 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Col8a2P25318 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Col8a2P25318 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a2P25318 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC10.34□□□□□ -0.75
Col8a2P25318 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.34□□□□□ -0.75
Col8a2P25318 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.34□□□□□ -0.75
Col8a2P25318 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC10.34□□□□□ -0.75
Col8a2P25318 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.34□□□□□ -0.75
Col8a2P25318 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC10.34□□□□□ -0.75
Col8a2P25318 Gm24990-201ENSMUST00000157406 323 ntBASIC10.34□□□□□ -0.75
Col8a2P25318 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.34□□□□□ -0.75
Col8a2P25318 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.34□□□□□ -0.75
Col8a2P25318 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.34□□□□□ -0.75
Col8a2P25318 Gm18827-201ENSMUST00000188341 790 ntBASIC10.34□□□□□ -0.75
Col8a2P25318 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.34□□□□□ -0.75
Col8a2P25318 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.34□□□□□ -0.75
Col8a2P25318 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.34□□□□□ -0.75
Col8a2P25318 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.34□□□□□ -0.75
Col8a2P25318 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.34□□□□□ -0.75
Col8a2P25318 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a2P25318 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a2P25318 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Col8a2P25318 Gm10312-201ENSMUST00000078515 489 ntBASIC10.34□□□□□ -0.75
Col8a2P25318 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Col8a2P25318 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a2P25318 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Col8a2P25318 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a2P25318 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a2P25318 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a2P25318 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a2P25318 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a2P25318 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a2P25318 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a2P25318 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a2P25318 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a2P25318 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Col8a2P25318 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a2P25318 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a2P25318 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a2P25318 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Col8a2P25318 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.34□□□□□ -0.75
Col8a2P25318 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Col8a2P25318 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Col8a2P25318 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 AC117194.1-201ENSMUST00000224847 3002 ntBASIC10.33□□□□□ -0.76
Col8a2P25318 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Gm15276-201ENSMUST00000145953 498 ntBASIC10.33□□□□□ -0.76
Col8a2P25318 Gm6963-201ENSMUST00000147879 379 ntBASIC10.33□□□□□ -0.76
Col8a2P25318 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.33□□□□□ -0.76
Col8a2P25318 Gm16505-201ENSMUST00000179981 232 ntBASIC10.33□□□□□ -0.76
Col8a2P25318 Gm2260-201ENSMUST00000184965 657 ntBASIC10.33□□□□□ -0.76
Col8a2P25318 Gm37466-201ENSMUST00000195692 652 ntBASIC10.33□□□□□ -0.76
Col8a2P25318 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.33□□□□□ -0.76
Col8a2P25318 Gm13097-201ENSMUST00000210722 397 ntBASIC10.33□□□□□ -0.76
Col8a2P25318 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC10.33□□□□□ -0.76
Col8a2P25318 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.33□□□□□ -0.76
Col8a2P25318 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.33□□□□□ -0.76
Col8a2P25318 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.33□□□□□ -0.76
Col8a2P25318 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.33□□□□□ -0.76
Col8a2P25318 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Col8a2P25318 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.33□□□□□ -0.76
Col8a2P25318 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.33□□□□□ -0.76
Col8a2P25318 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms