Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Sdc1P18828 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sdc1P18828 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.13□□□□□ -0.79
Sdc1P18828 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sdc1P18828 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Sdc1P18828 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sdc1P18828 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sdc1P18828 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.13□□□□□ -0.79
Sdc1P18828 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Sdc1P18828 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sdc1P18828 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sdc1P18828 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sdc1P18828 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sdc1P18828 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sdc1P18828 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.12□□□□□ -0.79
Sdc1P18828 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sdc1P18828 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sdc1P18828 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC10.12□□□□□ -0.79
Sdc1P18828 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sdc1P18828 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Sdc1P18828 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sdc1P18828 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC10.12□□□□□ -0.79
Sdc1P18828 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sdc1P18828 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sdc1P18828 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC10.12□□□□□ -0.79
Sdc1P18828 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC10.12□□□□□ -0.79
Sdc1P18828 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC10.12□□□□□ -0.79
Sdc1P18828 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.12□□□□□ -0.79
Sdc1P18828 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sdc1P18828 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sdc1P18828 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sdc1P18828 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sdc1P18828 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Sdc1P18828 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sdc1P18828 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.12□□□□□ -0.79
Sdc1P18828 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sdc1P18828 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.12□□□□□ -0.79
Sdc1P18828 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sdc1P18828 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sdc1P18828 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sdc1P18828 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sdc1P18828 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sdc1P18828 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
Sdc1P18828 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.12□□□□□ -0.79
Sdc1P18828 AC131586.3-201ENSMUST00000228355 1367 ntBASIC10.12□□□□□ -0.79
Sdc1P18828 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sdc1P18828 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Sdc1P18828 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Sdc1P18828 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Sdc1P18828 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Sdc1P18828 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Sdc1P18828 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.11□□□□□ -0.79
Sdc1P18828 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Sdc1P18828 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Sdc1P18828 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Sdc1P18828 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sdc1P18828 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Sdc1P18828 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sdc1P18828 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sdc1P18828 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.11□□□□□ -0.79
Sdc1P18828 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.11□□□□□ -0.79
Sdc1P18828 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.11□□□□□ -0.79
Sdc1P18828 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Sdc1P18828 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sdc1P18828 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC10.11□□□□□ -0.79
Sdc1P18828 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
Sdc1P18828 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC10.11□□□□□ -0.79
Sdc1P18828 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC10.11□□□□□ -0.79
Sdc1P18828 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC10.11□□□□□ -0.79
Sdc1P18828 Gm2651-201ENSMUST00000203560 838 ntBASIC10.11□□□□□ -0.79
Sdc1P18828 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Sdc1P18828 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC10.11□□□□□ -0.79
Sdc1P18828 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sdc1P18828 Mir339-201ENSMUST00000083659 96 ntBASIC10.11□□□□□ -0.79
Sdc1P18828 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sdc1P18828 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sdc1P18828 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Sdc1P18828 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Sdc1P18828 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.11□□□□□ -0.79
Sdc1P18828 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.11□□□□□ -0.79
Sdc1P18828 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.11□□□□□ -0.79
Sdc1P18828 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sdc1P18828 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.11□□□□□ -0.79
Sdc1P18828 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.11□□□□□ -0.79
Sdc1P18828 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sdc1P18828 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Sdc1P18828 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sdc1P18828 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sdc1P18828 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Sdc1P18828 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Sdc1P18828 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.1□□□□□ -0.79
Sdc1P18828 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sdc1P18828 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sdc1P18828 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sdc1P18828 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.1□□□□□ -0.79
Sdc1P18828 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sdc1P18828 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sdc1P18828 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.1□□□□□ -0.79
Sdc1P18828 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Sdc1P18828 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms