Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 AC122408.1-201ENSMUST00000218949 218 ntBASIC13.73□□□□□ -0.21
Hoxc6P10629 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxc6P10629 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxc6P10629 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxc6P10629 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxc6P10629 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.73□□□□□ -0.21
Hoxc6P10629 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxc6P10629 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxc6P10629 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Hoxc6P10629 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.73□□□□□ -0.21
Hoxc6P10629 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxc6P10629 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxc6P10629 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Hoxc6P10629 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxc6P10629 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Hoxc6P10629 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxc6P10629 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.73□□□□□ -0.21
Hoxc6P10629 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.73□□□□□ -0.21
Hoxc6P10629 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.73□□□□□ -0.21
Hoxc6P10629 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxc6P10629 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxc6P10629 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxc6P10629 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxc6P10629 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxc6P10629 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxc6P10629 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxc6P10629 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxc6P10629 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.72□□□□□ -0.21
Hoxc6P10629 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxc6P10629 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxc6P10629 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxc6P10629 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.72□□□□□ -0.21
Hoxc6P10629 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxc6P10629 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxc6P10629 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.72□□□□□ -0.21
Hoxc6P10629 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Hoxc6P10629 Gm7593-201ENSMUST00000187246 644 ntBASIC13.72□□□□□ -0.21
Hoxc6P10629 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Hoxc6P10629 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxc6P10629 Gm4607-201ENSMUST00000206649 577 ntBASIC13.72□□□□□ -0.21
Hoxc6P10629 Gm9463-201ENSMUST00000206707 601 ntBASIC13.72□□□□□ -0.21
Hoxc6P10629 CT485607.1-201ENSMUST00000216100 85 ntBASIC13.72□□□□□ -0.21
Hoxc6P10629 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxc6P10629 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.72□□□□□ -0.21
Hoxc6P10629 AC151275.1-201ENSMUST00000224870 585 ntBASIC13.72□□□□□ -0.21
Hoxc6P10629 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxc6P10629 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxc6P10629 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxc6P10629 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxc6P10629 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxc6P10629 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Hoxc6P10629 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Hoxc6P10629 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxc6P10629 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxc6P10629 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.72□□□□□ -0.21
Hoxc6P10629 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxc6P10629 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC13.72□□□□□ -0.21
Hoxc6P10629 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hoxc6P10629 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.72□□□□□ -0.21
Hoxc6P10629 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxc6P10629 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.71□□□□□ -0.21
Hoxc6P10629 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxc6P10629 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Hoxc6P10629 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxc6P10629 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxc6P10629 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxc6P10629 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxc6P10629 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.71□□□□□ -0.21
Hoxc6P10629 Gm9072-201ENSMUST00000218390 1514 ntBASIC13.71□□□□□ -0.21
Hoxc6P10629 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxc6P10629 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxc6P10629 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Hoxc6P10629 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Hoxc6P10629 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Hoxc6P10629 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC13.71□□□□□ -0.21
Hoxc6P10629 Gm14760-201ENSMUST00000121831 999 ntBASIC13.71□□□□□ -0.21
Hoxc6P10629 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.71□□□□□ -0.21
Hoxc6P10629 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC13.71□□□□□ -0.21
Hoxc6P10629 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.71□□□□□ -0.21
Hoxc6P10629 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC13.71□□□□□ -0.21
Hoxc6P10629 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.71□□□□□ -0.21
Hoxc6P10629 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.71□□□□□ -0.21
Hoxc6P10629 Gm45909-201ENSMUST00000212413 1031 ntBASIC13.71□□□□□ -0.21
Hoxc6P10629 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC13.71□□□□□ -0.21
Hoxc6P10629 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxc6P10629 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxc6P10629 Gm10288-201ENSMUST00000084614 537 ntBASIC13.71□□□□□ -0.21
Hoxc6P10629 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxc6P10629 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxc6P10629 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxc6P10629 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC13.71□□□□□ -0.21
Hoxc6P10629 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxc6P10629 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.71□□□□□ -0.21
Hoxc6P10629 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hoxc6P10629 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.71□□□□□ -0.21
Hoxc6P10629 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Hoxc6P10629 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Hoxc6P10629 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hoxc6P10629 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hoxc6P10629 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms