Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm16570-201ENSMUST00000161951 436 ntBASIC12.19□□□□□ -0.46
ClppO88696 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.19□□□□□ -0.46
ClppO88696 Gm29199-201ENSMUST00000187766 775 ntBASIC12.19□□□□□ -0.46
ClppO88696 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.19□□□□□ -0.46
ClppO88696 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.19□□□□□ -0.46
ClppO88696 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ClppO88696 Gm18056-201ENSMUST00000207670 568 ntBASIC12.19□□□□□ -0.46
ClppO88696 Gm18061-201ENSMUST00000208350 562 ntBASIC12.19□□□□□ -0.46
ClppO88696 Gm18063-201ENSMUST00000208529 568 ntBASIC12.19□□□□□ -0.46
ClppO88696 Gm18052-201ENSMUST00000208750 559 ntBASIC12.19□□□□□ -0.46
ClppO88696 Gm5904-201ENSMUST00000210286 865 ntBASIC12.19□□□□□ -0.46
ClppO88696 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.19□□□□□ -0.46
ClppO88696 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.19□□□□□ -0.46
ClppO88696 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.19□□□□□ -0.46
ClppO88696 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.19□□□□□ -0.46
ClppO88696 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
ClppO88696 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClppO88696 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClppO88696 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClppO88696 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClppO88696 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
ClppO88696 Gm24526-201ENSMUST00000082921 158 ntBASIC12.19□□□□□ -0.46
ClppO88696 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClppO88696 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ClppO88696 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ClppO88696 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
ClppO88696 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC12.19□□□□□ -0.46
ClppO88696 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
ClppO88696 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
ClppO88696 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.19□□□□□ -0.46
ClppO88696 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.19□□□□□ -0.46
ClppO88696 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClppO88696 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClppO88696 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClppO88696 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.19□□□□□ -0.46
ClppO88696 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.19□□□□□ -0.46
ClppO88696 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClppO88696 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClppO88696 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClppO88696 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
ClppO88696 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
ClppO88696 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ClppO88696 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.18□□□□□ -0.46
ClppO88696 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
ClppO88696 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.18□□□□□ -0.46
ClppO88696 Gm13316-201ENSMUST00000140537 691 ntBASIC12.18□□□□□ -0.46
ClppO88696 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.18□□□□□ -0.46
ClppO88696 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
ClppO88696 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.18□□□□□ -0.46
ClppO88696 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.18□□□□□ -0.46
ClppO88696 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.18□□□□□ -0.46
ClppO88696 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
ClppO88696 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.18□□□□□ -0.46
ClppO88696 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
ClppO88696 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
ClppO88696 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.18□□□□□ -0.46
ClppO88696 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ClppO88696 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.17□□□□□ -0.46
ClppO88696 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
ClppO88696 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.17□□□□□ -0.46
ClppO88696 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.17□□□□□ -0.46
ClppO88696 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ClppO88696 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms