Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Gm12859-201ENSMUST00000117834 427 ntBASIC11.27□□□□□ -0.61
Matn3O35701 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.27□□□□□ -0.61
Matn3O35701 Gm15376-201ENSMUST00000122258 783 ntBASIC11.27□□□□□ -0.61
Matn3O35701 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Matn3O35701 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.27□□□□□ -0.61
Matn3O35701 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Matn3O35701 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Matn3O35701 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Matn3O35701 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.27□□□□□ -0.61
Matn3O35701 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.27□□□□□ -0.61
Matn3O35701 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.27□□□□□ -0.61
Matn3O35701 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.27□□□□□ -0.61
Matn3O35701 Gm7653-201ENSMUST00000214567 508 ntBASIC11.27□□□□□ -0.61
Matn3O35701 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.27□□□□□ -0.61
Matn3O35701 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Matn3O35701 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Matn3O35701 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.27□□□□□ -0.61
Matn3O35701 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Matn3O35701 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Matn3O35701 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Matn3O35701 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.27□□□□□ -0.61
Matn3O35701 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
Matn3O35701 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Matn3O35701 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Matn3O35701 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Matn3O35701 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.27□□□□□ -0.61
Matn3O35701 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Matn3O35701 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.26□□□□□ -0.61
Matn3O35701 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Matn3O35701 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.26□□□□□ -0.61
Matn3O35701 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Matn3O35701 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.26□□□□□ -0.61
Matn3O35701 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.26□□□□□ -0.61
Matn3O35701 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Matn3O35701 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Matn3O35701 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Matn3O35701 Gm4875-201ENSMUST00000118257 786 ntBASIC11.26□□□□□ -0.61
Matn3O35701 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Matn3O35701 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.26□□□□□ -0.61
Matn3O35701 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.26□□□□□ -0.61
Matn3O35701 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.26□□□□□ -0.61
Matn3O35701 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.26□□□□□ -0.61
Matn3O35701 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.26□□□□□ -0.61
Matn3O35701 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.26□□□□□ -0.61
Matn3O35701 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Gm20445-201ENSMUST00000061905 565 ntBASIC11.26□□□□□ -0.61
Matn3O35701 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.26□□□□□ -0.61
Matn3O35701 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Mir339-201ENSMUST00000083659 96 ntBASIC11.26□□□□□ -0.61
Matn3O35701 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.26□□□□□ -0.61
Matn3O35701 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.26□□□□□ -0.61
Matn3O35701 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Matn3O35701 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Matn3O35701 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Matn3O35701 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Matn3O35701 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Matn3O35701 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Matn3O35701 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Matn3O35701 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Matn3O35701 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Matn3O35701 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Matn3O35701 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Matn3O35701 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.25□□□□□ -0.61
Matn3O35701 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Matn3O35701 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Matn3O35701 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Matn3O35701 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.25□□□□□ -0.61
Matn3O35701 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms