Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh9F8VPK8 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh9F8VPK8 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh9F8VPK8 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh9F8VPK8 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Gm13829-201ENSMUST00000119600 138 ntBASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Gm1335-201ENSMUST00000121653 386 ntBASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Gm4034-201ENSMUST00000187674 480 ntBASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Gm18304-201ENSMUST00000189162 546 ntBASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Gm6007-201ENSMUST00000208170 823 ntBASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Pcdh9F8VPK8 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Gm12314-201ENSMUST00000118104 538 ntBASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Gm9083-201ENSMUST00000120423 819 ntBASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Gm43433-201ENSMUST00000196573 481 ntBASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Gm45930-201ENSMUST00000221330 292 ntBASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Gm22058-201ENSMUST00000083393 310 ntBASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh9F8VPK8 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.68□□□□□ -0.38
Pcdh9F8VPK8 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms