Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Gm15198-201ENSMUST00000117283 177 ntBASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Gm11222-201ENSMUST00000119005 738 ntBASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Gm14832-201ENSMUST00000121289 322 ntBASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Gm7895-201ENSMUST00000187459 1173 ntBASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Gm38266-201ENSMUST00000194931 421 ntBASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Gm44882-201ENSMUST00000205702 802 ntBASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Gm45331-201ENSMUST00000209868 554 ntBASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cpsf4lE9Q2N0 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Gm21769-201ENSMUST00000211922 111 ntBASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Gm44414-201ENSMUST00000203660 2109 ntBASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cpsf4lE9Q2N0 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Cpsf4lE9Q2N0 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cpsf4lE9Q2N0 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cpsf4lE9Q2N0 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Cpsf4lE9Q2N0 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.47□□□□□ -0.73
Cpsf4lE9Q2N0 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Cpsf4lE9Q2N0 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cpsf4lE9Q2N0 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms