Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Gm8574-201ENSMUST00000203207 924 ntBASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Gm16209-201ENSMUST00000118457 627 ntBASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Gm10171-201ENSMUST00000126220 628 ntBASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Mir3091-201ENSMUST00000175086 76 ntBASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Zcwpw2-203ENSMUST00000187803 372 ntBASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Gm10233-201ENSMUST00000089275 628 ntBASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col6a3E9PWQ3 Adra1a-206ENSMUST00000225182 2337 ntBASIC12□□□□□ -0.49
Col6a3E9PWQ3 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Col6a3E9PWQ3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a3E9PWQ3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a3E9PWQ3 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a3E9PWQ3 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a3E9PWQ3 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col6a3E9PWQ3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12□□□□□ -0.49
Col6a3E9PWQ3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col6a3E9PWQ3 Gm13608-201ENSMUST00000121807 1406 ntBASIC12□□□□□ -0.49
Col6a3E9PWQ3 Gm15615-201ENSMUST00000118876 198 ntBASIC12□□□□□ -0.49
Col6a3E9PWQ3 Gm5419-201ENSMUST00000119301 527 ntBASIC12□□□□□ -0.49
Col6a3E9PWQ3 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC12□□□□□ -0.49
Col6a3E9PWQ3 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC12□□□□□ -0.49
Col6a3E9PWQ3 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC12□□□□□ -0.49
Col6a3E9PWQ3 1700069L16Rik-201ENSMUST00000047891 537 ntAPPRIS P5 TSL 2 BASIC12□□□□□ -0.49
Col6a3E9PWQ3 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a3E9PWQ3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a3E9PWQ3 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a3E9PWQ3 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a3E9PWQ3 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col6a3E9PWQ3 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Col6a3E9PWQ3 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col6a3E9PWQ3 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a3E9PWQ3 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a3E9PWQ3 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a3E9PWQ3 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC12□□□□□ -0.49
Col6a3E9PWQ3 Gm6859-201ENSMUST00000218614 989 ntBASIC12□□□□□ -0.49
Col6a3E9PWQ3 AC115304.2-201ENSMUST00000226399 332 ntBASIC12□□□□□ -0.49
Col6a3E9PWQ3 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a3E9PWQ3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12□□□□□ -0.49
Col6a3E9PWQ3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a3E9PWQ3 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col6a3E9PWQ3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a3E9PWQ3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a3E9PWQ3 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC12□□□□□ -0.49
Col6a3E9PWQ3 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a3E9PWQ3 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a3E9PWQ3 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col6a3E9PWQ3 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col6a3E9PWQ3 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Col6a3E9PWQ3 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a3E9PWQ3 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a3E9PWQ3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a3E9PWQ3 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a3E9PWQ3 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Col6a3E9PWQ3 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC11.99□□□□□ -0.49
Col6a3E9PWQ3 Gm16184-201ENSMUST00000162324 573 ntBASIC11.99□□□□□ -0.49
Col6a3E9PWQ3 Gm36980-201ENSMUST00000195643 622 ntBASIC11.99□□□□□ -0.49
Col6a3E9PWQ3 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a3E9PWQ3 Gm18504-201ENSMUST00000220917 929 ntBASIC11.99□□□□□ -0.49
Col6a3E9PWQ3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a3E9PWQ3 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a3E9PWQ3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC11.99□□□□□ -0.49
Col6a3E9PWQ3 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a3E9PWQ3 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC11.99□□□□□ -0.49
Col6a3E9PWQ3 Araf-202ENSMUST00000120356 1520 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a3E9PWQ3 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a3E9PWQ3 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Col6a3E9PWQ3 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Col6a3E9PWQ3 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a3E9PWQ3 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.99□□□□□ -0.49
Col6a3E9PWQ3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a3E9PWQ3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a3E9PWQ3 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms