Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Dchs1E9PVD3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Gm4868-201ENSMUST00000164138 789 ntBASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Gm9916-201ENSMUST00000192943 1228 ntBASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Gm44958-201ENSMUST00000203734 736 ntBASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Matn2-203ENSMUST00000226766 3252 ntBASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Mir6407-201ENSMUST00000184510 101 ntBASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 CT485606.1-201ENSMUST00000213187 878 ntBASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Gng5-ps-201ENSMUST00000120931 205 ntBASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Gm35713-201ENSMUST00000210516 199 ntBASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Dchs1E9PVD3 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 AC124433.1-201ENSMUST00000224483 1063 ntBASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Gm24231-201ENSMUST00000104315 133 ntBASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Gm6390-201ENSMUST00000215034 589 ntBASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Dchs1E9PVD3 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.67□□□□□ -0.7
Dchs1E9PVD3 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Dchs1E9PVD3 Rnft1-201ENSMUST00000020827 4452 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Dchs1E9PVD3 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Dchs1E9PVD3 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 356.9 ms