Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm3543D3Z235 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.27□□□□□ -0.6
Gm3543D3Z235 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm3543D3Z235 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm3543D3Z235 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm3543D3Z235 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Gm3543D3Z235 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Gm3543D3Z235 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.27□□□□□ -0.6
Gm3543D3Z235 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm3543D3Z235 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm3543D3Z235 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Gm3543D3Z235 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Gm3543D3Z235 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3543D3Z235 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3543D3Z235 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3543D3Z235 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.27□□□□□ -0.61
Gm3543D3Z235 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.27□□□□□ -0.61
Gm3543D3Z235 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3543D3Z235 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.27□□□□□ -0.61
Gm3543D3Z235 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.27□□□□□ -0.61
Gm3543D3Z235 Gm38341-201ENSMUST00000195357 515 ntBASIC11.27□□□□□ -0.61
Gm3543D3Z235 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.27□□□□□ -0.61
Gm3543D3Z235 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.27□□□□□ -0.61
Gm3543D3Z235 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.27□□□□□ -0.61
Gm3543D3Z235 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.27□□□□□ -0.61
Gm3543D3Z235 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3543D3Z235 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3543D3Z235 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3543D3Z235 Gm24526-201ENSMUST00000082921 158 ntBASIC11.27□□□□□ -0.61
Gm3543D3Z235 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3543D3Z235 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3543D3Z235 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3543D3Z235 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3543D3Z235 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3543D3Z235 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3543D3Z235 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3543D3Z235 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3543D3Z235 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Gm3543D3Z235 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Gm3543D3Z235 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3543D3Z235 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.27□□□□□ -0.61
Gm3543D3Z235 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.27□□□□□ -0.61
Gm3543D3Z235 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3543D3Z235 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm3543D3Z235 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3543D3Z235 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Gm11222-201ENSMUST00000119005 738 ntBASIC11.26□□□□□ -0.61
Gm3543D3Z235 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Gm2991-201ENSMUST00000173338 480 ntBASIC11.26□□□□□ -0.61
Gm3543D3Z235 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.26□□□□□ -0.61
Gm3543D3Z235 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Gm45865-201ENSMUST00000211815 945 ntBASIC11.26□□□□□ -0.61
Gm3543D3Z235 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.26□□□□□ -0.61
Gm3543D3Z235 AC154532.1-201ENSMUST00000227860 965 ntBASIC11.26□□□□□ -0.61
Gm3543D3Z235 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.26□□□□□ -0.61
Gm3543D3Z235 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Gm3543D3Z235 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3543D3Z235 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.26□□□□□ -0.61
Gm3543D3Z235 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm3543D3Z235 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm3543D3Z235 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm3543D3Z235 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm3543D3Z235 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Gm3543D3Z235 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Gm3543D3Z235 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm3543D3Z235 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm3543D3Z235 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm3543D3Z235 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm3543D3Z235 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm3543D3Z235 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gm3543D3Z235 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms