Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1aA2APX8 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1aA2APX8 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1aA2APX8 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1aA2APX8 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1aA2APX8 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.92□□□□□ -0.34
Scn1aA2APX8 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.92□□□□□ -0.34
Scn1aA2APX8 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.92□□□□□ -0.34
Scn1aA2APX8 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Scn1aA2APX8 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Gm11511-201ENSMUST00000118146 540 ntBASIC12.91□□□□□ -0.34
Scn1aA2APX8 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.91□□□□□ -0.34
Scn1aA2APX8 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.91□□□□□ -0.34
Scn1aA2APX8 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1aA2APX8 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1aA2APX8 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Scn1aA2APX8 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.91□□□□□ -0.34
Scn1aA2APX8 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Map1b-203ENSMUST00000223725 2669 ntBASIC12.91□□□□□ -0.34
Scn1aA2APX8 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.91□□□□□ -0.34
Scn1aA2APX8 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Scn1aA2APX8 AY036118-201ENSMUST00000200021 923 ntBASIC12.91□□□□□ -0.34
Scn1aA2APX8 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.91□□□□□ -0.34
Scn1aA2APX8 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.91□□□□□ -0.34
Scn1aA2APX8 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1aA2APX8 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1aA2APX8 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1aA2APX8 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1aA2APX8 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1aA2APX8 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Scn1aA2APX8 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1aA2APX8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1aA2APX8 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Scn1aA2APX8 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scn1aA2APX8 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.9□□□□□ -0.34
Scn1aA2APX8 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.9□□□□□ -0.34
Scn1aA2APX8 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms