Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atg4a-psA0A0G2JFS9 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC15.04■□□□□ -0
Atg4a-psA0A0G2JFS9 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Atg4a-psA0A0G2JFS9 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC15.04■□□□□ -0
Atg4a-psA0A0G2JFS9 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atg4a-psA0A0G2JFS9 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atg4a-psA0A0G2JFS9 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Atg4a-psA0A0G2JFS9 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atg4a-psA0A0G2JFS9 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC15.04■□□□□ -0
Atg4a-psA0A0G2JFS9 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atg4a-psA0A0G2JFS9 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Atg4a-psA0A0G2JFS9 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC15.04■□□□□ -0
Atg4a-psA0A0G2JFS9 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC15.04■□□□□ -0
Atg4a-psA0A0G2JFS9 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atg4a-psA0A0G2JFS9 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Atg4a-psA0A0G2JFS9 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Atg4a-psA0A0G2JFS9 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atg4a-psA0A0G2JFS9 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Gm14726-201ENSMUST00000120623 896 ntBASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Gm26956-201ENSMUST00000182176 986 ntBASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 AC122371.3-201ENSMUST00000223402 1061 ntBASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Gm42748-201ENSMUST00000199354 2341 ntBASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC15.03■□□□□ -0
Atg4a-psA0A0G2JFS9 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Atg4a-psA0A0G2JFS9 Map1b-203ENSMUST00000223725 2669 ntBASIC15.02■□□□□ -0
Atg4a-psA0A0G2JFS9 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Atg4a-psA0A0G2JFS9 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC15.02■□□□□ -0
Atg4a-psA0A0G2JFS9 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Atg4a-psA0A0G2JFS9 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Atg4a-psA0A0G2JFS9 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Atg4a-psA0A0G2JFS9 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC15.02■□□□□ -0
Atg4a-psA0A0G2JFS9 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Atg4a-psA0A0G2JFS9 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC15.02■□□□□ -0
Atg4a-psA0A0G2JFS9 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC15.02■□□□□ -0
Atg4a-psA0A0G2JFS9 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC15.02■□□□□ -0
Atg4a-psA0A0G2JFS9 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC15.02■□□□□ -0
Atg4a-psA0A0G2JFS9 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC15.02■□□□□ -0
Atg4a-psA0A0G2JFS9 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Atg4a-psA0A0G2JFS9 Gm43758-201ENSMUST00000199500 367 ntBASIC15.02■□□□□ -0
Atg4a-psA0A0G2JFS9 Gm45331-201ENSMUST00000209868 554 ntBASIC15.02■□□□□ -0
Atg4a-psA0A0G2JFS9 Gm7619-201ENSMUST00000210649 1282 ntBASIC15.02■□□□□ -0
Atg4a-psA0A0G2JFS9 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC15.02■□□□□ -0
Atg4a-psA0A0G2JFS9 AC163667.3-201ENSMUST00000225774 222 ntBASIC15.02■□□□□ -0
Atg4a-psA0A0G2JFS9 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Atg4a-psA0A0G2JFS9 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Atg4a-psA0A0G2JFS9 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Atg4a-psA0A0G2JFS9 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Atg4a-psA0A0G2JFS9 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Atg4a-psA0A0G2JFS9 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Atg4a-psA0A0G2JFS9 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Atg4a-psA0A0G2JFS9 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Atg4a-psA0A0G2JFS9 Gm44831-201ENSMUST00000208469 2989 ntBASIC15.02□□□□□ -0.01
Atg4a-psA0A0G2JFS9 AC154517.2-201ENSMUST00000220829 2458 ntBASIC15.02□□□□□ -0.01
Atg4a-psA0A0G2JFS9 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Atg4a-psA0A0G2JFS9 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Atg4a-psA0A0G2JFS9 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atg4a-psA0A0G2JFS9 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atg4a-psA0A0G2JFS9 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Atg4a-psA0A0G2JFS9 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Atg4a-psA0A0G2JFS9 AC157950.1-201ENSMUST00000217561 2168 ntBASIC15.01□□□□□ -0.01
Atg4a-psA0A0G2JFS9 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atg4a-psA0A0G2JFS9 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atg4a-psA0A0G2JFS9 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atg4a-psA0A0G2JFS9 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Atg4a-psA0A0G2JFS9 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Atg4a-psA0A0G2JFS9 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC15.01□□□□□ -0.01
Atg4a-psA0A0G2JFS9 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Atg4a-psA0A0G2JFS9 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC15.01□□□□□ -0.01
Atg4a-psA0A0G2JFS9 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC15.01□□□□□ -0.01
Atg4a-psA0A0G2JFS9 Gm8885-201ENSMUST00000189382 598 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms