Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Dctn4-202ENSMUST00000223590 1530 ntBASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm14660-201ENSMUST00000119809 575 ntBASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm11591-201ENSMUST00000120063 702 ntBASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm15703-201ENSMUST00000120250 880 ntBASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm29100-201ENSMUST00000187564 4410 ntBASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 AC126253.1-201ENSMUST00000227974 824 ntBASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm10371-202ENSMUST00000228010 1081 ntBASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 n-R5s195-201ENSMUST00000082891 119 ntBASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm5780-201ENSMUST00000217774 1834 ntBASIC9.01□□□□□ -0.97
Trav9n-2A0A0G2JDP3 CT009757.3-201ENSMUST00000223367 2320 ntBASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 AC126262.1-201ENSMUST00000221802 1904 ntBASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm24231-201ENSMUST00000104315 133 ntBASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm9431-201ENSMUST00000119765 1051 ntBASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm9630-201ENSMUST00000178304 885 ntBASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm3890-201ENSMUST00000182416 207 ntBASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm43433-201ENSMUST00000196573 481 ntBASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms