Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Upk1bQ9Z2C6 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1bQ9Z2C6 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1bQ9Z2C6 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1bQ9Z2C6 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1bQ9Z2C6 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1bQ9Z2C6 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1bQ9Z2C6 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1bQ9Z2C6 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Upk1bQ9Z2C6 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.5□□□□□ -0.57
Upk1bQ9Z2C6 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1bQ9Z2C6 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Upk1bQ9Z2C6 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Gm17208-201ENSMUST00000168388 535 ntBASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Mir6956-201ENSMUST00000183598 62 ntBASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Gm37935-201ENSMUST00000192012 982 ntBASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Gm44882-201ENSMUST00000205702 802 ntBASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Upk1bQ9Z2C6 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Gm37042-201ENSMUST00000193816 581 ntBASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Gm6218-201ENSMUST00000219812 628 ntBASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Upk1bQ9Z2C6 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms