Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Gm23912-201ENSMUST00000104687 87 ntBASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Gm12217-201ENSMUST00000118858 696 ntBASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Gm5616-201ENSMUST00000165252 384 ntBASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Gm8741-201ENSMUST00000174736 384 ntBASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Mir6927-201ENSMUST00000184494 71 ntBASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Gm37666-201ENSMUST00000194110 866 ntBASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Gm18711-201ENSMUST00000199341 750 ntBASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Gm18753-201ENSMUST00000201000 566 ntBASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Smarcb1Q9Z0H3 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Gm28450-201ENSMUST00000187349 638 ntBASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Gm28071-201ENSMUST00000190355 478 ntBASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms