Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
ClcnkaQ9WUB7 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Gm37008-201ENSMUST00000195712 319 ntBASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ClcnkaQ9WUB7 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClcnkaQ9WUB7 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ClcnkaQ9WUB7 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
ClcnkaQ9WUB7 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClcnkaQ9WUB7 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
ClcnkaQ9WUB7 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
ClcnkaQ9WUB7 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClcnkaQ9WUB7 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ClcnkaQ9WUB7 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClcnkaQ9WUB7 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClcnkaQ9WUB7 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ClcnkaQ9WUB7 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClcnkaQ9WUB7 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClcnkaQ9WUB7 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClcnkaQ9WUB7 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClcnkaQ9WUB7 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
ClcnkaQ9WUB7 Gm23931-201ENSMUST00000103842 109 ntBASIC11.46□□□□□ -0.57
ClcnkaQ9WUB7 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ClcnkaQ9WUB7 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.46□□□□□ -0.57
ClcnkaQ9WUB7 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.46□□□□□ -0.57
ClcnkaQ9WUB7 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.46□□□□□ -0.57
ClcnkaQ9WUB7 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ClcnkaQ9WUB7 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ClcnkaQ9WUB7 Gm5904-201ENSMUST00000210286 865 ntBASIC11.46□□□□□ -0.57
ClcnkaQ9WUB7 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.46□□□□□ -0.57
ClcnkaQ9WUB7 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms