Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.09□□□□□ -0.47
Cdh17Q9R100 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh17Q9R100 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh17Q9R100 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh17Q9R100 Gm12502-201ENSMUST00000120197 444 ntBASIC12.09□□□□□ -0.47
Cdh17Q9R100 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.09□□□□□ -0.47
Cdh17Q9R100 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.09□□□□□ -0.47
Cdh17Q9R100 Gm4034-201ENSMUST00000187674 480 ntBASIC12.09□□□□□ -0.47
Cdh17Q9R100 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.09□□□□□ -0.47
Cdh17Q9R100 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh17Q9R100 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh17Q9R100 Gm7653-201ENSMUST00000214567 508 ntBASIC12.09□□□□□ -0.47
Cdh17Q9R100 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.09□□□□□ -0.47
Cdh17Q9R100 Gm45930-201ENSMUST00000221330 292 ntBASIC12.09□□□□□ -0.47
Cdh17Q9R100 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh17Q9R100 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh17Q9R100 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh17Q9R100 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh17Q9R100 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh17Q9R100 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Cdh17Q9R100 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh17Q9R100 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cdh17Q9R100 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.09□□□□□ -0.47
Cdh17Q9R100 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh17Q9R100 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Cdh17Q9R100 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh17Q9R100 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh17Q9R100 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh17Q9R100 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh17Q9R100 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdh17Q9R100 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cdh17Q9R100 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cdh17Q9R100 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cdh17Q9R100 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh17Q9R100 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh17Q9R100 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh17Q9R100 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.08□□□□□ -0.48
Cdh17Q9R100 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh17Q9R100 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh17Q9R100 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh17Q9R100 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cdh17Q9R100 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.08□□□□□ -0.48
Cdh17Q9R100 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh17Q9R100 Gm11478-201ENSMUST00000117851 599 ntBASIC12.08□□□□□ -0.48
Cdh17Q9R100 Gm11591-201ENSMUST00000120063 702 ntBASIC12.08□□□□□ -0.48
Cdh17Q9R100 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh17Q9R100 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.08□□□□□ -0.48
Cdh17Q9R100 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.08□□□□□ -0.48
Cdh17Q9R100 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh17Q9R100 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.08□□□□□ -0.48
Cdh17Q9R100 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.08□□□□□ -0.48
Cdh17Q9R100 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.08□□□□□ -0.48
Cdh17Q9R100 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh17Q9R100 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cdh17Q9R100 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh17Q9R100 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh17Q9R100 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.08□□□□□ -0.48
Cdh17Q9R100 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.08□□□□□ -0.48
Cdh17Q9R100 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cdh17Q9R100 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Cdh17Q9R100 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh17Q9R100 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.08□□□□□ -0.48
Cdh17Q9R100 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh17Q9R100 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cdh17Q9R100 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh17Q9R100 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh17Q9R100 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdh17Q9R100 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh17Q9R100 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Cdh17Q9R100 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh17Q9R100 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.07□□□□□ -0.48
Cdh17Q9R100 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh17Q9R100 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh17Q9R100 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh17Q9R100 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh17Q9R100 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh17Q9R100 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.07□□□□□ -0.48
Cdh17Q9R100 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh17Q9R100 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh17Q9R100 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh17Q9R100 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cdh17Q9R100 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh17Q9R100 Gm13736-201ENSMUST00000119272 253 ntBASIC12.07□□□□□ -0.48
Cdh17Q9R100 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh17Q9R100 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.07□□□□□ -0.48
Cdh17Q9R100 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.07□□□□□ -0.48
Cdh17Q9R100 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh17Q9R100 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.07□□□□□ -0.48
Cdh17Q9R100 Gm8738-201ENSMUST00000172606 329 ntBASIC12.07□□□□□ -0.48
Cdh17Q9R100 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cdh17Q9R100 Gm44405-201ENSMUST00000198952 126 ntBASIC12.07□□□□□ -0.48
Cdh17Q9R100 Gm43818-201ENSMUST00000200605 466 ntBASIC12.07□□□□□ -0.48
Cdh17Q9R100 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.07□□□□□ -0.48
Cdh17Q9R100 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.07□□□□□ -0.48
Cdh17Q9R100 Gm5904-201ENSMUST00000210286 865 ntBASIC12.07□□□□□ -0.48
Cdh17Q9R100 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cdh17Q9R100 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.07□□□□□ -0.48
Cdh17Q9R100 Gm45925-201ENSMUST00000218882 744 ntBASIC12.07□□□□□ -0.48
Cdh17Q9R100 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdh17Q9R100 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms