Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.35□□□□□ -0.27
Cpsf3Q9QXK7 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf3Q9QXK7 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf3Q9QXK7 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cpsf3Q9QXK7 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf3Q9QXK7 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cpsf3Q9QXK7 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf3Q9QXK7 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf3Q9QXK7 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf3Q9QXK7 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf3Q9QXK7 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf3Q9QXK7 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.35□□□□□ -0.27
Cpsf3Q9QXK7 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.35□□□□□ -0.27
Cpsf3Q9QXK7 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf3Q9QXK7 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.35□□□□□ -0.27
Cpsf3Q9QXK7 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.35□□□□□ -0.27
Cpsf3Q9QXK7 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf3Q9QXK7 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf3Q9QXK7 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Cpsf3Q9QXK7 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Gm12015-201ENSMUST00000117065 843 ntBASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf3Q9QXK7 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Cpsf3Q9QXK7 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.33□□□□□ -0.27
Cpsf3Q9QXK7 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cpsf3Q9QXK7 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Cpsf3Q9QXK7 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Gm24934-201ENSMUST00000103764 111 ntBASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Gm15276-201ENSMUST00000145953 498 ntBASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Gm44967-201ENSMUST00000207047 631 ntBASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cpsf3Q9QXK7 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cpsf3Q9QXK7 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cpsf3Q9QXK7 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.32□□□□□ -0.28
Cpsf3Q9QXK7 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms