Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Nkx2-4Q9EQM3 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-4Q9EQM3 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-4Q9EQM3 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.71□□□□□ -0.37
Nkx2-4Q9EQM3 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-4Q9EQM3 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-4Q9EQM3 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.71□□□□□ -0.37
Nkx2-4Q9EQM3 Gm15566-201ENSMUST00000121130 590 ntBASIC12.71□□□□□ -0.37
Nkx2-4Q9EQM3 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-4Q9EQM3 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.71□□□□□ -0.37
Nkx2-4Q9EQM3 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.71□□□□□ -0.37
Nkx2-4Q9EQM3 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.71□□□□□ -0.37
Nkx2-4Q9EQM3 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-4Q9EQM3 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Nkx2-4Q9EQM3 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Nkx2-4Q9EQM3 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-4Q9EQM3 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-4Q9EQM3 Gm9139-201ENSMUST00000218817 700 ntBASIC12.71□□□□□ -0.37
Nkx2-4Q9EQM3 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-4Q9EQM3 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-4Q9EQM3 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.71□□□□□ -0.37
Nkx2-4Q9EQM3 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-4Q9EQM3 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.71□□□□□ -0.38
Nkx2-4Q9EQM3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx2-4Q9EQM3 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx2-4Q9EQM3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx2-4Q9EQM3 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx2-4Q9EQM3 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.71□□□□□ -0.38
Nkx2-4Q9EQM3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx2-4Q9EQM3 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.71□□□□□ -0.38
Nkx2-4Q9EQM3 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Nkx2-4Q9EQM3 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.38
Nkx2-4Q9EQM3 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Gm15352-201ENSMUST00000118696 270 ntBASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Gm11980-201ENSMUST00000121445 986 ntBASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Gm8737-201ENSMUST00000122208 642 ntBASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Gm23045-201ENSMUST00000175041 96 ntBASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Gm7902-201ENSMUST00000198842 947 ntBASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Gm43778-201ENSMUST00000199438 199 ntBASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx2-4Q9EQM3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Gm14219-201ENSMUST00000120414 288 ntBASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Gm45575-201ENSMUST00000210283 548 ntBASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Gm9111-201ENSMUST00000219394 709 ntBASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx2-4Q9EQM3 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms