Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nip7Q9CXK8 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC15.41■□□□□ 0.06
Nip7Q9CXK8 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nip7Q9CXK8 Gm9129-201ENSMUST00000218173 1689 ntBASIC15.41■□□□□ 0.06
Nip7Q9CXK8 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nip7Q9CXK8 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Nip7Q9CXK8 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nip7Q9CXK8 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nip7Q9CXK8 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Gm9072-201ENSMUST00000218390 1514 ntBASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Gm12857-201ENSMUST00000117678 592 ntBASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Gm6210-201ENSMUST00000204734 1942 ntBASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Zkscan3-207ENSMUST00000223831 2101 ntBASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Nip7Q9CXK8 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Nip7Q9CXK8 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Gm8199-201ENSMUST00000121323 823 ntBASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Gm8343-201ENSMUST00000182705 994 ntBASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC15.39■□□□□ 0.05
Nip7Q9CXK8 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Mir7686-201ENSMUST00000200604 57 ntBASIC15.39■□□□□ 0.05
Nip7Q9CXK8 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nip7Q9CXK8 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC15.39■□□□□ 0.05
Nip7Q9CXK8 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Gm26035-201ENSMUST00000083065 308 ntBASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Gm10288-201ENSMUST00000084614 537 ntBASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nip7Q9CXK8 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Nip7Q9CXK8 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nip7Q9CXK8 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nip7Q9CXK8 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Nip7Q9CXK8 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nip7Q9CXK8 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nip7Q9CXK8 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nip7Q9CXK8 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nip7Q9CXK8 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nip7Q9CXK8 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nip7Q9CXK8 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nip7Q9CXK8 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nip7Q9CXK8 Gm5385-201ENSMUST00000118988 1559 ntBASIC15.38■□□□□ 0.05
Nip7Q9CXK8 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms