Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Cldnd1Q9CQX5 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Gm11511-201ENSMUST00000118146 540 ntBASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Gm15595-201ENSMUST00000120840 961 ntBASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.67□□□□□ -0.38
Cldnd1Q9CQX5 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Gm15566-201ENSMUST00000121130 590 ntBASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Gm22442-201ENSMUST00000157256 144 ntBASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Mir1956-201ENSMUST00000157748 65 ntBASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Gm44329-201ENSMUST00000197469 112 ntBASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Gm9797-202ENSMUST00000218003 294 ntBASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms