Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RTRAFQ9CQE8 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
RTRAFQ9CQE8 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RTRAFQ9CQE8 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RTRAFQ9CQE8 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
RTRAFQ9CQE8 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RTRAFQ9CQE8 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RTRAFQ9CQE8 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RTRAFQ9CQE8 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RTRAFQ9CQE8 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
RTRAFQ9CQE8 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RTRAFQ9CQE8 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
RTRAFQ9CQE8 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
RTRAFQ9CQE8 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
RTRAFQ9CQE8 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 AC159114.1-201ENSMUST00000220349 266 ntBASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
RTRAFQ9CQE8 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
RTRAFQ9CQE8 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms