Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Gm23984-201ENSMUST00000157139 203 ntBASIC11.75□□□□□ -0.53
Ska1Q9CPV1 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.75□□□□□ -0.53
Ska1Q9CPV1 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Mir339-201ENSMUST00000083659 96 ntBASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ska1Q9CPV1 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Gm6745-201ENSMUST00000199216 526 ntBASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Gm35960-201ENSMUST00000202712 767 ntBASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ska1Q9CPV1 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms