Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.88□□□□□ -0.35
Cdk5rap3Q99LM2 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk5rap3Q99LM2 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk5rap3Q99LM2 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk5rap3Q99LM2 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk5rap3Q99LM2 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk5rap3Q99LM2 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk5rap3Q99LM2 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.88□□□□□ -0.35
Cdk5rap3Q99LM2 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk5rap3Q99LM2 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.88□□□□□ -0.35
Cdk5rap3Q99LM2 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Cdk5rap3Q99LM2 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cdk5rap3Q99LM2 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk5rap3Q99LM2 Map1b-203ENSMUST00000223725 2669 ntBASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Gm13492-201ENSMUST00000119772 665 ntBASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Gm11964-201ENSMUST00000120982 444 ntBASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Gm27847-201ENSMUST00000183711 107 ntBASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Gm27375-201ENSMUST00000183799 107 ntBASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Gm24136-201ENSMUST00000083374 165 ntBASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk5rap3Q99LM2 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.85□□□□□ -0.35
Cdk5rap3Q99LM2 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms