Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdha3Q91Y16 Daam2-202ENSMUST00000224595 1926 ntBASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Morn2-202ENSMUST00000227729 656 ntBASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdha3Q91Y16 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pcdha3Q91Y16 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha3Q91Y16 Gm13722-201ENSMUST00000117964 3066 ntBASIC13□□□□□ -0.33
Pcdha3Q91Y16 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha3Q91Y16 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha3Q91Y16 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha3Q91Y16 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Pcdha3Q91Y16 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdha3Q91Y16 Gm5053-201ENSMUST00000208361 1678 ntBASIC13□□□□□ -0.33
Pcdha3Q91Y16 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha3Q91Y16 Gm4735-201ENSMUST00000138679 1302 ntBASIC13□□□□□ -0.33
Pcdha3Q91Y16 Gm5855-201ENSMUST00000200240 1305 ntBASIC13□□□□□ -0.33
Pcdha3Q91Y16 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha3Q91Y16 Gm15370-201ENSMUST00000117158 253 ntBASIC13□□□□□ -0.33
Pcdha3Q91Y16 Gm11222-201ENSMUST00000119005 738 ntBASIC13□□□□□ -0.33
Pcdha3Q91Y16 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13□□□□□ -0.33
Pcdha3Q91Y16 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13□□□□□ -0.33
Pcdha3Q91Y16 Gm13342-201ENSMUST00000121055 207 ntBASIC13□□□□□ -0.33
Pcdha3Q91Y16 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdha3Q91Y16 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdha3Q91Y16 Gm8018-201ENSMUST00000173536 789 ntBASIC13□□□□□ -0.33
Pcdha3Q91Y16 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Pcdha3Q91Y16 Gm43822-201ENSMUST00000200285 476 ntBASIC13□□□□□ -0.33
Pcdha3Q91Y16 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13□□□□□ -0.33
Pcdha3Q91Y16 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdha3Q91Y16 Gm8227-201ENSMUST00000223306 571 ntBASIC13□□□□□ -0.33
Pcdha3Q91Y16 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdha3Q91Y16 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha3Q91Y16 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha3Q91Y16 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha3Q91Y16 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdha3Q91Y16 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha3Q91Y16 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha3Q91Y16 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha3Q91Y16 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha3Q91Y16 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha3Q91Y16 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha3Q91Y16 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha3Q91Y16 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Pcdha3Q91Y16 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdha3Q91Y16 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdha3Q91Y16 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdha3Q91Y16 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms