Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Gm14127-201ENSMUST00000117906 678 ntBASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Gm15806-201ENSMUST00000120696 955 ntBASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Mir7654-201ENSMUST00000185082 70 ntBASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhb3Q91XZ7 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Gm9002-201ENSMUST00000178437 499 ntBASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 AC153899.1-201ENSMUST00000214092 1117 ntBASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 CT009711.2-202ENSMUST00000224538 973 ntBASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Pcdhb3Q91XZ7 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Pcdhb3Q91XZ7 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.58□□□□□ -0.39
Pcdhb3Q91XZ7 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Gm11652-201ENSMUST00000117842 1267 ntBASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Gm8988-201ENSMUST00000155015 1240 ntBASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhb3Q91XZ7 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms