Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.39□□□□□ -0.43
Pcdhb4Q91XZ6 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Gm12363-201ENSMUST00000122250 668 ntBASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Gm26035-201ENSMUST00000083065 308 ntBASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb4Q91XZ6 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb4Q91XZ6 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb4Q91XZ6 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pcdhb4Q91XZ6 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pcdhb4Q91XZ6 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb4Q91XZ6 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdhb4Q91XZ6 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pcdhb4Q91XZ6 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pcdhb4Q91XZ6 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb4Q91XZ6 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb4Q91XZ6 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb4Q91XZ6 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb4Q91XZ6 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb4Q91XZ6 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb4Q91XZ6 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb4Q91XZ6 Gm7029-201ENSMUST00000173226 450 ntBASIC12.36□□□□□ -0.43
Pcdhb4Q91XZ6 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.36□□□□□ -0.43
Pcdhb4Q91XZ6 Gm44487-201ENSMUST00000205145 325 ntBASIC12.36□□□□□ -0.43
Pcdhb4Q91XZ6 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.36□□□□□ -0.43
Pcdhb4Q91XZ6 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.36□□□□□ -0.43
Pcdhb4Q91XZ6 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms