Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdhb5Q91XZ5 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Gm13408-201ENSMUST00000119822 798 ntBASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Gm13935-201ENSMUST00000121859 798 ntBASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Gm3508-201ENSMUST00000186012 792 ntBASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Gm10109-202ENSMUST00000206890 1211 ntBASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 AC154276.3-201ENSMUST00000227643 998 ntBASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Ntng1-201ENSMUST00000051253 327 ntBASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb5Q91XZ5 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Gm12165-201ENSMUST00000117047 342 ntBASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Gm12501-201ENSMUST00000119163 529 ntBASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Rprl1-201ENSMUST00000158050 327 ntBASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Gm19353-201ENSMUST00000184561 445 ntBASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Gm13812-201ENSMUST00000118061 1347 ntBASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Gm13810-201ENSMUST00000118584 1347 ntBASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Pcdhb5Q91XZ5 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb5Q91XZ5 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.58□□□□□ -0.07
Pcdhb5Q91XZ5 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb5Q91XZ5 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb5Q91XZ5 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Pcdhb5Q91XZ5 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb5Q91XZ5 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb5Q91XZ5 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb5Q91XZ5 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC14.58□□□□□ -0.08
Pcdhb5Q91XZ5 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Pcdhb5Q91XZ5 Gm23596-201ENSMUST00000104304 132 ntBASIC14.58□□□□□ -0.08
Pcdhb5Q91XZ5 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms