Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Gm25043-201ENSMUST00000158604 212 ntBASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Gm42627-201ENSMUST00000197347 224 ntBASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pcdhb6Q91XZ4 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Gm4034-201ENSMUST00000187674 480 ntBASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Gm5950-201ENSMUST00000213337 772 ntBASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Pcdhb6Q91XZ4 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Gm12742-201ENSMUST00000117326 410 ntBASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Gm13392-201ENSMUST00000117708 150 ntBASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Morn2-202ENSMUST00000227729 656 ntBASIC12.73□□□□□ -0.37
Pcdhb6Q91XZ4 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 101.1 ms