Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx1Q91V10 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Vsx1Q91V10 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Vsx1Q91V10 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Gm29155-201ENSMUST00000185910 269 ntBASIC12.31□□□□□ -0.44
Vsx1Q91V10 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.31□□□□□ -0.44
Vsx1Q91V10 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.31□□□□□ -0.44
Vsx1Q91V10 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.31□□□□□ -0.44
Vsx1Q91V10 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx1Q91V10 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx1Q91V10 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.3□□□□□ -0.44
Vsx1Q91V10 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.3□□□□□ -0.44
Vsx1Q91V10 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Gm28882-201ENSMUST00000185504 314 ntBASIC12.3□□□□□ -0.44
Vsx1Q91V10 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.3□□□□□ -0.44
Vsx1Q91V10 Gm39404-201ENSMUST00000216350 313 ntBASIC12.3□□□□□ -0.44
Vsx1Q91V10 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.3□□□□□ -0.44
Vsx1Q91V10 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.3□□□□□ -0.44
Vsx1Q91V10 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.3□□□□□ -0.44
Vsx1Q91V10 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vsx1Q91V10 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vsx1Q91V10 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms