Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3a1Q8K4Z5 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3a1Q8K4Z5 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3a1Q8K4Z5 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sf3a1Q8K4Z5 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sf3a1Q8K4Z5 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Sf3a1Q8K4Z5 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC15.21■□□□□ 0.02
Sf3a1Q8K4Z5 Gm43321-201ENSMUST00000198897 2409 ntBASIC15.21■□□□□ 0.02
Sf3a1Q8K4Z5 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Nudt18-202ENSMUST00000228554 3619 ntBASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 AC126262.1-201ENSMUST00000221802 1904 ntBASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Gm8494-201ENSMUST00000178171 1233 ntBASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Gm9630-201ENSMUST00000178304 885 ntBASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Gm26956-201ENSMUST00000182176 986 ntBASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Gm3961-201ENSMUST00000204425 994 ntBASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Olfr582-201ENSMUST00000098212 960 ntBASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sf3a1Q8K4Z5 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Gm20554-201ENSMUST00000177421 2352 ntBASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Gm23119-201ENSMUST00000158610 140 ntBASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Gm38341-201ENSMUST00000195357 515 ntBASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Gm43758-201ENSMUST00000199500 367 ntBASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Gm43822-201ENSMUST00000200285 476 ntBASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 AC113031.8-201ENSMUST00000227856 631 ntBASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sf3a1Q8K4Z5 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC15.18■□□□□ 0.02
Sf3a1Q8K4Z5 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3a1Q8K4Z5 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC15.18■□□□□ 0.02
Sf3a1Q8K4Z5 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3a1Q8K4Z5 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3a1Q8K4Z5 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3a1Q8K4Z5 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sf3a1Q8K4Z5 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms