Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn1Q8K445 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn1Q8K445 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn1Q8K445 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn1Q8K445 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.72□□□□□ -0.53
Clrn1Q8K445 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn1Q8K445 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn1Q8K445 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn1Q8K445 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn1Q8K445 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn1Q8K445 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn1Q8K445 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.72□□□□□ -0.53
Clrn1Q8K445 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn1Q8K445 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn1Q8K445 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn1Q8K445 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn1Q8K445 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn1Q8K445 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn1Q8K445 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn1Q8K445 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn1Q8K445 Gm13392-201ENSMUST00000117708 150 ntBASIC11.72□□□□□ -0.53
Clrn1Q8K445 Gm13736-201ENSMUST00000119272 253 ntBASIC11.72□□□□□ -0.53
Clrn1Q8K445 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn1Q8K445 Gm13316-201ENSMUST00000140537 691 ntBASIC11.72□□□□□ -0.53
Clrn1Q8K445 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn1Q8K445 Gm18054-201ENSMUST00000207539 555 ntBASIC11.72□□□□□ -0.53
Clrn1Q8K445 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn1Q8K445 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Clrn1Q8K445 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Clrn1Q8K445 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Clrn1Q8K445 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.72□□□□□ -0.53
Clrn1Q8K445 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn1Q8K445 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn1Q8K445 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.72□□□□□ -0.53
Clrn1Q8K445 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Clrn1Q8K445 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.72□□□□□ -0.53
Clrn1Q8K445 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn1Q8K445 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn1Q8K445 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clrn1Q8K445 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Clrn1Q8K445 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Clrn1Q8K445 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clrn1Q8K445 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.71□□□□□ -0.53
Clrn1Q8K445 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Clrn1Q8K445 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clrn1Q8K445 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clrn1Q8K445 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Clrn1Q8K445 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clrn1Q8K445 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clrn1Q8K445 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Clrn1Q8K445 Gm11793-201ENSMUST00000120433 981 ntBASIC11.71□□□□□ -0.53
Clrn1Q8K445 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.71□□□□□ -0.53
Clrn1Q8K445 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Clrn1Q8K445 Mospd4-201ENSMUST00000180618 576 ntBASIC11.71□□□□□ -0.53
Clrn1Q8K445 Gm38158-201ENSMUST00000194617 339 ntBASIC11.71□□□□□ -0.53
Clrn1Q8K445 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.71□□□□□ -0.53
Clrn1Q8K445 Gm10608-202ENSMUST00000213924 676 ntBASIC11.71□□□□□ -0.53
Clrn1Q8K445 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clrn1Q8K445 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Clrn1Q8K445 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clrn1Q8K445 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Clrn1Q8K445 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clrn1Q8K445 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.71□□□□□ -0.54
Clrn1Q8K445 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clrn1Q8K445 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Clrn1Q8K445 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clrn1Q8K445 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clrn1Q8K445 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.71□□□□□ -0.54
Clrn1Q8K445 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clrn1Q8K445 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Clrn1Q8K445 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.71□□□□□ -0.54
Clrn1Q8K445 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Clrn1Q8K445 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clrn1Q8K445 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.7□□□□□ -0.54
Clrn1Q8K445 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.7□□□□□ -0.54
Clrn1Q8K445 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.7□□□□□ -0.54
Clrn1Q8K445 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Clrn1Q8K445 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.7□□□□□ -0.54
Clrn1Q8K445 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms