Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Gm40466-201ENSMUST00000212174 422 ntBASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Gm22058-201ENSMUST00000083393 310 ntBASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.68□□□□□ -0.06
Cchcr1Q8K2I2 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Gm12390-201ENSMUST00000117897 397 ntBASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Gm12314-201ENSMUST00000118104 538 ntBASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Gm11591-201ENSMUST00000120063 702 ntBASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Gm23119-201ENSMUST00000158610 140 ntBASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Gm18304-201ENSMUST00000189162 546 ntBASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Gm44405-201ENSMUST00000198952 126 ntBASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cchcr1Q8K2I2 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.66□□□□□ -0.06
Cchcr1Q8K2I2 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.66□□□□□ -0.06
Cchcr1Q8K2I2 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.66□□□□□ -0.06
Cchcr1Q8K2I2 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.66□□□□□ -0.06
Cchcr1Q8K2I2 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cchcr1Q8K2I2 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cchcr1Q8K2I2 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cchcr1Q8K2I2 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cchcr1Q8K2I2 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Cchcr1Q8K2I2 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.66□□□□□ -0.06
Cchcr1Q8K2I2 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cchcr1Q8K2I2 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.66□□□□□ -0.06
Cchcr1Q8K2I2 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cchcr1Q8K2I2 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cchcr1Q8K2I2 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cchcr1Q8K2I2 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cchcr1Q8K2I2 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.66□□□□□ -0.06
Cchcr1Q8K2I2 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cchcr1Q8K2I2 Gm25927-201ENSMUST00000175058 117 ntBASIC14.66□□□□□ -0.06
Cchcr1Q8K2I2 Gm35960-201ENSMUST00000202712 767 ntBASIC14.66□□□□□ -0.06
Cchcr1Q8K2I2 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.66□□□□□ -0.06
Cchcr1Q8K2I2 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cchcr1Q8K2I2 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC14.66□□□□□ -0.06
Cchcr1Q8K2I2 Gm5781-201ENSMUST00000219792 443 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms