Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Gm10156-201ENSMUST00000122364 462 ntBASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Rmrp-201ENSMUST00000157463 271 ntBASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Lysmd4Q8CC84 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Gm13612-201ENSMUST00000119276 390 ntBASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Gm9022-201ENSMUST00000182482 992 ntBASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Gm37922-201ENSMUST00000195596 455 ntBASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Gm38092-201ENSMUST00000195600 653 ntBASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Gm32025-201ENSMUST00000217960 307 ntBASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lysmd4Q8CC84 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lysmd4Q8CC84 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms