Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Gm12742-201ENSMUST00000117326 410 ntBASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Gm14127-201ENSMUST00000117906 678 ntBASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Gm27572-201ENSMUST00000183702 255 ntBASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim9Q8C7M3 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Gm4034-201ENSMUST00000187674 480 ntBASIC13.67□□□□□ -0.22
Trim9Q8C7M3 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Gm42627-201ENSMUST00000197347 224 ntBASIC13.67□□□□□ -0.22
Trim9Q8C7M3 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Gm5950-201ENSMUST00000213337 772 ntBASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Morn2-202ENSMUST00000227729 656 ntBASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim9Q8C7M3 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Gm11531-201ENSMUST00000117614 555 ntBASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Gm17420-201ENSMUST00000164753 153 ntBASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Gm29396-201ENSMUST00000185659 716 ntBASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Gm42599-201ENSMUST00000201308 469 ntBASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Olfr284-202ENSMUST00000206647 966 ntBASIC13.66□□□□□ -0.22
Trim9Q8C7M3 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.66□□□□□ -0.22
Trim9Q8C7M3 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim9Q8C7M3 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim9Q8C7M3 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms