Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube3dQ8BX13 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube3dQ8BX13 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.09□□□□□ -0.63
Ube3dQ8BX13 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube3dQ8BX13 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Ube3dQ8BX13 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube3dQ8BX13 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube3dQ8BX13 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube3dQ8BX13 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube3dQ8BX13 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Ube3dQ8BX13 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube3dQ8BX13 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube3dQ8BX13 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ube3dQ8BX13 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ube3dQ8BX13 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ube3dQ8BX13 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ube3dQ8BX13 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ube3dQ8BX13 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.09□□□□□ -0.63
Ube3dQ8BX13 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC11.09□□□□□ -0.63
Ube3dQ8BX13 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.09□□□□□ -0.63
Ube3dQ8BX13 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.08□□□□□ -0.63
Ube3dQ8BX13 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Mir8109-201ENSMUST00000184375 117 ntBASIC11.08□□□□□ -0.64
Ube3dQ8BX13 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Gm43822-201ENSMUST00000200285 476 ntBASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.08□□□□□ -0.64
Ube3dQ8BX13 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ube3dQ8BX13 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Gm3890-201ENSMUST00000182416 207 ntBASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Gm29396-201ENSMUST00000185659 716 ntBASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Gm18584-201ENSMUST00000203098 964 ntBASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Gm3961-201ENSMUST00000204425 994 ntBASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Gm10608-202ENSMUST00000213924 676 ntBASIC11.07□□□□□ -0.64
Ube3dQ8BX13 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.07□□□□□ -0.64
Ube3dQ8BX13 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms