Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 AC124732.2-201ENSMUST00000221977 316 ntBASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Chchd1-203ENSMUST00000224633 557 ntBASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smco3Q8BQM7 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Pum1-201ENSMUST00000030315 5389 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Gm13453-201ENSMUST00000118708 357 ntBASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Gm9522-201ENSMUST00000182394 926 ntBASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Gm19078-201ENSMUST00000206311 727 ntBASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Gm44771-201ENSMUST00000206975 626 ntBASIC10.22□□□□□ -0.77
Smco3Q8BQM7 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Smco3Q8BQM7 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco3Q8BQM7 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco3Q8BQM7 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco3Q8BQM7 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco3Q8BQM7 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.77
Smco3Q8BQM7 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smco3Q8BQM7 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.21□□□□□ -0.77
Smco3Q8BQM7 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Smco3Q8BQM7 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms