Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col16a1Q8BLX7 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Gm17213-201ENSMUST00000165161 1360 ntBASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Gm43692-201ENSMUST00000198236 1062 ntBASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Gm44552-201ENSMUST00000205458 1247 ntBASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 AC140375.1-201ENSMUST00000225421 694 ntBASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col16a1Q8BLX7 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col16a1Q8BLX7 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
Col16a1Q8BLX7 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col16a1Q8BLX7 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col16a1Q8BLX7 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col16a1Q8BLX7 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC15.96■□□□□ 0.15
Col16a1Q8BLX7 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC15.96■□□□□ 0.15
Col16a1Q8BLX7 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC15.96■□□□□ 0.15
Col16a1Q8BLX7 Gm8342-201ENSMUST00000209839 757 ntBASIC15.96■□□□□ 0.15
Col16a1Q8BLX7 Gm25201-201ENSMUST00000083093 170 ntBASIC15.96■□□□□ 0.15
Col16a1Q8BLX7 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col16a1Q8BLX7 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Col16a1Q8BLX7 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col16a1Q8BLX7 Gm8155-201ENSMUST00000216363 1612 ntBASIC15.96■□□□□ 0.15
Col16a1Q8BLX7 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col16a1Q8BLX7 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col16a1Q8BLX7 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col16a1Q8BLX7 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col16a1Q8BLX7 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col16a1Q8BLX7 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col16a1Q8BLX7 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col16a1Q8BLX7 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col16a1Q8BLX7 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col16a1Q8BLX7 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col16a1Q8BLX7 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col16a1Q8BLX7 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col16a1Q8BLX7 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms