Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Gm11918-201ENSMUST00000121660 179 ntBASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Gm8515-201ENSMUST00000194852 576 ntBASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Gm9908-201ENSMUST00000211534 448 ntBASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Gm15897-201ENSMUST00000117770 1486 ntBASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Cdhr3Q8BL00 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Gm6244-201ENSMUST00000178732 841 ntBASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Gm24136-201ENSMUST00000083374 165 ntBASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Gm13050-201ENSMUST00000122149 1345 ntBASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Cdhr3Q8BL00 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms