Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.31□□□□□ -0.44
Ubp1Q811S7 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ubp1Q811S7 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.3□□□□□ -0.44
Ubp1Q811S7 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.3□□□□□ -0.44
Ubp1Q811S7 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Gm13875-201ENSMUST00000120162 282 ntBASIC12.3□□□□□ -0.44
Ubp1Q811S7 Gm15703-201ENSMUST00000120250 880 ntBASIC12.3□□□□□ -0.44
Ubp1Q811S7 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Rmrp-201ENSMUST00000157463 271 ntBASIC12.3□□□□□ -0.44
Ubp1Q811S7 Gm8018-201ENSMUST00000173536 789 ntBASIC12.3□□□□□ -0.44
Ubp1Q811S7 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Gm6334-201ENSMUST00000207083 228 ntBASIC12.3□□□□□ -0.44
Ubp1Q811S7 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.3□□□□□ -0.44
Ubp1Q811S7 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.3□□□□□ -0.44
Ubp1Q811S7 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC12.3□□□□□ -0.44
Ubp1Q811S7 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.3□□□□□ -0.44
Ubp1Q811S7 AC154757.2-201ENSMUST00000228885 743 ntBASIC12.3□□□□□ -0.44
Ubp1Q811S7 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.3□□□□□ -0.44
Ubp1Q811S7 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Ubp1Q811S7 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.3□□□□□ -0.44
Ubp1Q811S7 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.3□□□□□ -0.44
Ubp1Q811S7 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ubp1Q811S7 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.29□□□□□ -0.44
Ubp1Q811S7 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Gm11597-201ENSMUST00000121423 964 ntBASIC12.29□□□□□ -0.44
Ubp1Q811S7 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Ubp1Q811S7 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.29□□□□□ -0.44
Ubp1Q811S7 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.29□□□□□ -0.44
Ubp1Q811S7 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC12.29□□□□□ -0.44
Ubp1Q811S7 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Gm8227-201ENSMUST00000223306 571 ntBASIC12.29□□□□□ -0.44
Ubp1Q811S7 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ubp1Q811S7 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms