Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Gm15131-201ENSMUST00000119124 595 ntBASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Gm15432-201ENSMUST00000121106 195 ntBASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Gm44126-201ENSMUST00000204831 514 ntBASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Gm8285-201ENSMUST00000208293 759 ntBASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Gm44551-201ENSMUST00000208804 171 ntBASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Gm17827-201ENSMUST00000211825 742 ntBASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 AC154849.4-201ENSMUST00000224868 365 ntBASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Usp6nlQ80XC3 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.71□□□□□ -0.21
Usp6nlQ80XC3 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Usp6nlQ80XC3 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Usp6nlQ80XC3 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Usp6nlQ80XC3 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Usp6nlQ80XC3 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.71□□□□□ -0.21
Usp6nlQ80XC3 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Usp6nlQ80XC3 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Usp6nlQ80XC3 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Usp6nlQ80XC3 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Usp6nlQ80XC3 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Usp6nlQ80XC3 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Usp6nlQ80XC3 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Usp6nlQ80XC3 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Usp6nlQ80XC3 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Usp6nlQ80XC3 Gm7851-201ENSMUST00000117574 323 ntBASIC13.71□□□□□ -0.21
Usp6nlQ80XC3 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC13.71□□□□□ -0.21
Usp6nlQ80XC3 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.21
Usp6nlQ80XC3 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Usp6nlQ80XC3 Olfr1347-205ENSMUST00000220413 964 ntBASIC13.71□□□□□ -0.21
Usp6nlQ80XC3 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.71□□□□□ -0.21
Usp6nlQ80XC3 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Usp6nlQ80XC3 Gm5455-201ENSMUST00000058710 715 ntBASIC13.71□□□□□ -0.21
Usp6nlQ80XC3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Usp6nlQ80XC3 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.71□□□□□ -0.21
Usp6nlQ80XC3 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.21
Usp6nlQ80XC3 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.21
Usp6nlQ80XC3 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Usp6nlQ80XC3 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Usp6nlQ80XC3 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Usp6nlQ80XC3 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Usp6nlQ80XC3 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Usp6nlQ80XC3 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Usp6nlQ80XC3 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp6nlQ80XC3 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp6nlQ80XC3 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp6nlQ80XC3 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Usp6nlQ80XC3 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp6nlQ80XC3 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp6nlQ80XC3 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp6nlQ80XC3 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Usp6nlQ80XC3 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Usp6nlQ80XC3 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Usp6nlQ80XC3 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Usp6nlQ80XC3 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Usp6nlQ80XC3 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Usp6nlQ80XC3 Gm25881-201ENSMUST00000157783 103 ntBASIC13.7□□□□□ -0.22
Usp6nlQ80XC3 Gm19459-201ENSMUST00000176240 835 ntBASIC13.7□□□□□ -0.22
Usp6nlQ80XC3 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Usp6nlQ80XC3 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13.7□□□□□ -0.22
Usp6nlQ80XC3 Mir7677-201ENSMUST00000184226 67 ntBASIC13.7□□□□□ -0.22
Usp6nlQ80XC3 Gm4482-201ENSMUST00000200876 742 ntBASIC13.7□□□□□ -0.22
Usp6nlQ80XC3 Gm44545-201ENSMUST00000208262 746 ntBASIC13.7□□□□□ -0.22
Usp6nlQ80XC3 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.7□□□□□ -0.22
Usp6nlQ80XC3 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms