Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Usp8Q80U87 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.5□□□□□ -0.41
Usp8Q80U87 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Usp8Q80U87 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp8Q80U87 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp8Q80U87 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Usp8Q80U87 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.5□□□□□ -0.41
Usp8Q80U87 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Usp8Q80U87 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.5□□□□□ -0.41
Usp8Q80U87 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Usp8Q80U87 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp8Q80U87 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Usp8Q80U87 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp8Q80U87 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp8Q80U87 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp8Q80U87 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp8Q80U87 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Usp8Q80U87 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Usp8Q80U87 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp8Q80U87 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Usp8Q80U87 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Usp8Q80U87 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Usp8Q80U87 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp8Q80U87 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp8Q80U87 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp8Q80U87 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp8Q80U87 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Usp8Q80U87 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Usp8Q80U87 Snord83b-201ENSMUST00000104546 94 ntBASIC12.49□□□□□ -0.41
Usp8Q80U87 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Usp8Q80U87 Gm13369-201ENSMUST00000119442 987 ntBASIC12.49□□□□□ -0.41
Usp8Q80U87 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.49□□□□□ -0.41
Usp8Q80U87 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp8Q80U87 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.49□□□□□ -0.41
Usp8Q80U87 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp8Q80U87 Gm10146-201ENSMUST00000072739 309 ntBASIC12.49□□□□□ -0.41
Usp8Q80U87 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.49□□□□□ -0.41
Usp8Q80U87 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp8Q80U87 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Usp8Q80U87 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp8Q80U87 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp8Q80U87 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp8Q80U87 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Usp8Q80U87 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp8Q80U87 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp8Q80U87 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp8Q80U87 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.49□□□□□ -0.41
Usp8Q80U87 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp8Q80U87 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.49□□□□□ -0.41
Usp8Q80U87 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Usp8Q80U87 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Usp8Q80U87 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Usp8Q80U87 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp8Q80U87 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp8Q80U87 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.48□□□□□ -0.41
Usp8Q80U87 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Usp8Q80U87 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Usp8Q80U87 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Usp8Q80U87 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.48□□□□□ -0.41
Usp8Q80U87 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp8Q80U87 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp8Q80U87 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Usp8Q80U87 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp8Q80U87 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Usp8Q80U87 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp8Q80U87 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp8Q80U87 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp8Q80U87 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.48□□□□□ -0.41
Usp8Q80U87 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp8Q80U87 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.48□□□□□ -0.41
Usp8Q80U87 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Usp8Q80U87 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp8Q80U87 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp8Q80U87 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.48□□□□□ -0.41
Usp8Q80U87 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.48□□□□□ -0.41
Usp8Q80U87 Gm24644-201ENSMUST00000157114 139 ntBASIC12.48□□□□□ -0.41
Usp8Q80U87 Gm22331-201ENSMUST00000158066 136 ntBASIC12.48□□□□□ -0.41
Usp8Q80U87 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.48□□□□□ -0.41
Usp8Q80U87 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp8Q80U87 Gm17208-201ENSMUST00000168388 535 ntBASIC12.48□□□□□ -0.41
Usp8Q80U87 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp8Q80U87 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.48□□□□□ -0.41
Usp8Q80U87 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.48□□□□□ -0.41
Usp8Q80U87 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp8Q80U87 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp8Q80U87 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp8Q80U87 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.48□□□□□ -0.41
Usp8Q80U87 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Usp8Q80U87 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.48□□□□□ -0.41
Usp8Q80U87 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Usp8Q80U87 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp8Q80U87 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp8Q80U87 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp8Q80U87 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.48□□□□□ -0.41
Usp8Q80U87 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp8Q80U87 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.48□□□□□ -0.41
Usp8Q80U87 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Usp8Q80U87 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Usp8Q80U87 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Usp8Q80U87 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms