Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Gm38092-201ENSMUST00000195600 653 ntBASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Gm37497-201ENSMUST00000195830 798 ntBASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Scaf4Q6PFF0 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Gm12859-201ENSMUST00000117834 427 ntBASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Gm14057-201ENSMUST00000120631 482 ntBASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.22□□□□□ -0.45
Scaf4Q6PFF0 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms