Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a2Q64739 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.68□□□□□ -0.06
Col11a2Q64739 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.68□□□□□ -0.06
Col11a2Q64739 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.68□□□□□ -0.06
Col11a2Q64739 Gm19680-201ENSMUST00000095050 1513 ntBASIC14.68□□□□□ -0.06
Col11a2Q64739 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a2Q64739 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a2Q64739 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a2Q64739 Gm11470-201ENSMUST00000118868 1475 ntBASIC14.68□□□□□ -0.06
Col11a2Q64739 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.68□□□□□ -0.06
Col11a2Q64739 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a2Q64739 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a2Q64739 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a2Q64739 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.68□□□□□ -0.06
Col11a2Q64739 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a2Q64739 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Col11a2Q64739 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Col11a2Q64739 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a2Q64739 Gm12791-201ENSMUST00000120788 655 ntBASIC14.68□□□□□ -0.06
Col11a2Q64739 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a2Q64739 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a2Q64739 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a2Q64739 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC14.68□□□□□ -0.06
Col11a2Q64739 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Col11a2Q64739 Gm10807-201ENSMUST00000177134 795 ntBASIC14.68□□□□□ -0.06
Col11a2Q64739 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a2Q64739 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC14.68□□□□□ -0.06
Col11a2Q64739 Gm5340-201ENSMUST00000203733 880 ntBASIC14.68□□□□□ -0.06
Col11a2Q64739 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC14.68□□□□□ -0.06
Col11a2Q64739 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC14.68□□□□□ -0.06
Col11a2Q64739 Gm4978-201ENSMUST00000071565 801 ntBASIC14.68□□□□□ -0.06
Col11a2Q64739 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Col11a2Q64739 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a2Q64739 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a2Q64739 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.68□□□□□ -0.06
Col11a2Q64739 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.68□□□□□ -0.06
Col11a2Q64739 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Col11a2Q64739 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a2Q64739 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a2Q64739 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a2Q64739 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col11a2Q64739 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a2Q64739 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a2Q64739 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a2Q64739 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a2Q64739 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Col11a2Q64739 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a2Q64739 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a2Q64739 Gm11578-201ENSMUST00000118530 459 ntBASIC14.67□□□□□ -0.06
Col11a2Q64739 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a2Q64739 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC14.67□□□□□ -0.06
Col11a2Q64739 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Col11a2Q64739 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Col11a2Q64739 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Col11a2Q64739 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Col11a2Q64739 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Col11a2Q64739 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Col11a2Q64739 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Col11a2Q64739 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC14.67□□□□□ -0.06
Col11a2Q64739 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC14.67□□□□□ -0.06
Col11a2Q64739 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a2Q64739 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Col11a2Q64739 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Col11a2Q64739 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Col11a2Q64739 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a2Q64739 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a2Q64739 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a2Q64739 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a2Q64739 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a2Q64739 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Col11a2Q64739 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a2Q64739 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a2Q64739 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a2Q64739 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.67□□□□□ -0.06
Col11a2Q64739 Gm8155-201ENSMUST00000216363 1612 ntBASIC14.67□□□□□ -0.06
Col11a2Q64739 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a2Q64739 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a2Q64739 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col11a2Q64739 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.66□□□□□ -0.06
Col11a2Q64739 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Col11a2Q64739 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Col11a2Q64739 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC14.66□□□□□ -0.06
Col11a2Q64739 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a2Q64739 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC14.66□□□□□ -0.06
Col11a2Q64739 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC14.66□□□□□ -0.06
Col11a2Q64739 Gm25604-201ENSMUST00000158359 133 ntBASIC14.66□□□□□ -0.06
Col11a2Q64739 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Col11a2Q64739 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Col11a2Q64739 Gm9135-201ENSMUST00000182963 990 ntBASIC14.66□□□□□ -0.06
Col11a2Q64739 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a2Q64739 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Col11a2Q64739 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a2Q64739 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.66□□□□□ -0.06
Col11a2Q64739 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC14.66□□□□□ -0.06
Col11a2Q64739 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC14.66□□□□□ -0.06
Col11a2Q64739 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.66□□□□□ -0.06
Col11a2Q64739 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Col11a2Q64739 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a2Q64739 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col11a2Q64739 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms