Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ctr9Q62018 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.68□□□□□ -0.06
Ctr9Q62018 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.68□□□□□ -0.06
Ctr9Q62018 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ctr9Q62018 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ctr9Q62018 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ctr9Q62018 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.68□□□□□ -0.06
Ctr9Q62018 Gm7293-201ENSMUST00000216682 1007 ntBASIC14.68□□□□□ -0.06
Ctr9Q62018 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ctr9Q62018 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ctr9Q62018 Gm10312-201ENSMUST00000078515 489 ntBASIC14.68□□□□□ -0.06
Ctr9Q62018 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ctr9Q62018 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ctr9Q62018 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.68□□□□□ -0.06
Ctr9Q62018 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ctr9Q62018 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.68□□□□□ -0.06
Ctr9Q62018 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Ctr9Q62018 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ctr9Q62018 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ctr9Q62018 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ctr9Q62018 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ctr9Q62018 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Ctr9Q62018 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ctr9Q62018 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ctr9Q62018 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ctr9Q62018 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctr9Q62018 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctr9Q62018 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctr9Q62018 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctr9Q62018 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ctr9Q62018 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctr9Q62018 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctr9Q62018 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctr9Q62018 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctr9Q62018 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctr9Q62018 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctr9Q62018 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ctr9Q62018 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.67□□□□□ -0.06
Ctr9Q62018 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.67□□□□□ -0.06
Ctr9Q62018 Gm29199-201ENSMUST00000187766 775 ntBASIC14.67□□□□□ -0.06
Ctr9Q62018 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.67□□□□□ -0.06
Ctr9Q62018 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.67□□□□□ -0.06
Ctr9Q62018 Gm45186-201ENSMUST00000206874 478 ntBASIC14.67□□□□□ -0.06
Ctr9Q62018 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.67□□□□□ -0.06
Ctr9Q62018 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.67□□□□□ -0.06
Ctr9Q62018 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ctr9Q62018 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Ctr9Q62018 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctr9Q62018 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctr9Q62018 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.67□□□□□ -0.06
Ctr9Q62018 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ctr9Q62018 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Ctr9Q62018 AC123857.2-201ENSMUST00000225756 1582 ntBASIC14.67□□□□□ -0.06
Ctr9Q62018 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.67□□□□□ -0.06
Ctr9Q62018 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctr9Q62018 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctr9Q62018 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctr9Q62018 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctr9Q62018 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctr9Q62018 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctr9Q62018 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctr9Q62018 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ctr9Q62018 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ctr9Q62018 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ctr9Q62018 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ctr9Q62018 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Ctr9Q62018 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ctr9Q62018 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.66□□□□□ -0.06
Ctr9Q62018 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.66□□□□□ -0.06
Ctr9Q62018 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Ctr9Q62018 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ctr9Q62018 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ctr9Q62018 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ctr9Q62018 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Ctr9Q62018 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ctr9Q62018 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ctr9Q62018 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ctr9Q62018 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.66□□□□□ -0.06
Ctr9Q62018 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ctr9Q62018 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ctr9Q62018 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.66□□□□□ -0.06
Ctr9Q62018 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ctr9Q62018 Gm23119-201ENSMUST00000158610 140 ntBASIC14.66□□□□□ -0.06
Ctr9Q62018 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.66□□□□□ -0.06
Ctr9Q62018 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.66□□□□□ -0.06
Ctr9Q62018 Gm2383-201ENSMUST00000181461 807 ntBASIC14.66□□□□□ -0.06
Ctr9Q62018 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ctr9Q62018 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ctr9Q62018 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.66□□□□□ -0.06
Ctr9Q62018 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.66□□□□□ -0.06
Ctr9Q62018 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ctr9Q62018 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ctr9Q62018 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ctr9Q62018 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ctr9Q62018 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ctr9Q62018 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ctr9Q62018 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.66□□□□□ -0.06
Ctr9Q62018 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ctr9Q62018 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ctr9Q62018 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms