Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.93□□□□□ -0.34
Smarcd1Q61466 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smarcd1Q61466 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd1Q61466 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd1Q61466 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Gm13296-201ENSMUST00000117854 997 ntBASIC12.92□□□□□ -0.34
Smarcd1Q61466 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.92□□□□□ -0.34
Smarcd1Q61466 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.92□□□□□ -0.34
Smarcd1Q61466 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Gm2383-201ENSMUST00000181461 807 ntBASIC12.92□□□□□ -0.34
Smarcd1Q61466 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Gm32999-201ENSMUST00000192693 562 ntBASIC12.92□□□□□ -0.34
Smarcd1Q61466 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.92□□□□□ -0.34
Smarcd1Q61466 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.92□□□□□ -0.34
Smarcd1Q61466 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.92□□□□□ -0.34
Smarcd1Q61466 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd1Q61466 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.92□□□□□ -0.34
Smarcd1Q61466 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd1Q61466 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Smarcd1Q61466 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Smarcd1Q61466 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.91□□□□□ -0.34
Smarcd1Q61466 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.91□□□□□ -0.34
Smarcd1Q61466 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.91□□□□□ -0.34
Smarcd1Q61466 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd1Q61466 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.91□□□□□ -0.34
Smarcd1Q61466 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.91□□□□□ -0.34
Smarcd1Q61466 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd1Q61466 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Smarcd1Q61466 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms