Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Satb1Q60611 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Satb1Q60611 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Satb1Q60611 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Satb1Q60611 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Satb1Q60611 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Satb1Q60611 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.96□□□□□ -0.33
Satb1Q60611 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Satb1Q60611 Gm17208-201ENSMUST00000168388 535 ntBASIC12.96□□□□□ -0.33
Satb1Q60611 Gm18734-201ENSMUST00000172937 808 ntBASIC12.96□□□□□ -0.33
Satb1Q60611 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Satb1Q60611 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.96□□□□□ -0.33
Satb1Q60611 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Satb1Q60611 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.96□□□□□ -0.33
Satb1Q60611 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.96□□□□□ -0.33
Satb1Q60611 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Satb1Q60611 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Satb1Q60611 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Satb1Q60611 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Satb1Q60611 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Satb1Q60611 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Satb1Q60611 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Satb1Q60611 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Satb1Q60611 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Satb1Q60611 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Satb1Q60611 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Satb1Q60611 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Satb1Q60611 Grk6-205ENSMUST00000224653 2976 ntBASIC12.96□□□□□ -0.34
Satb1Q60611 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Satb1Q60611 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Satb1Q60611 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Satb1Q60611 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Satb1Q60611 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Satb1Q60611 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Satb1Q60611 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.95□□□□□ -0.34
Satb1Q60611 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Satb1Q60611 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.95□□□□□ -0.34
Satb1Q60611 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Satb1Q60611 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Satb1Q60611 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Satb1Q60611 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.95□□□□□ -0.34
Satb1Q60611 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Satb1Q60611 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Satb1Q60611 Map1b-203ENSMUST00000223725 2669 ntBASIC12.95□□□□□ -0.34
Satb1Q60611 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Satb1Q60611 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Satb1Q60611 Gm12029-201ENSMUST00000120073 832 ntBASIC12.95□□□□□ -0.34
Satb1Q60611 Gm15432-201ENSMUST00000121106 195 ntBASIC12.95□□□□□ -0.34
Satb1Q60611 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Satb1Q60611 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.95□□□□□ -0.34
Satb1Q60611 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Satb1Q60611 Gm28693-202ENSMUST00000190758 331 ntBASIC12.95□□□□□ -0.34
Satb1Q60611 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.95□□□□□ -0.34
Satb1Q60611 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.95□□□□□ -0.34
Satb1Q60611 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Satb1Q60611 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Satb1Q60611 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Satb1Q60611 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.95□□□□□ -0.34
Satb1Q60611 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Satb1Q60611 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Satb1Q60611 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Satb1Q60611 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Satb1Q60611 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Satb1Q60611 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Satb1Q60611 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Satb1Q60611 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Satb1Q60611 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Satb1Q60611 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Satb1Q60611 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Satb1Q60611 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Satb1Q60611 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Satb1Q60611 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.95□□□□□ -0.34
Satb1Q60611 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Satb1Q60611 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Satb1Q60611 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Satb1Q60611 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Satb1Q60611 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.94□□□□□ -0.34
Satb1Q60611 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Satb1Q60611 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Satb1Q60611 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.94□□□□□ -0.34
Satb1Q60611 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Satb1Q60611 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.94□□□□□ -0.34
Satb1Q60611 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Satb1Q60611 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Satb1Q60611 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Satb1Q60611 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Satb1Q60611 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Satb1Q60611 Gm6447-201ENSMUST00000118905 835 ntBASIC12.94□□□□□ -0.34
Satb1Q60611 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC12.94□□□□□ -0.34
Satb1Q60611 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.94□□□□□ -0.34
Satb1Q60611 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Satb1Q60611 Gm24749-201ENSMUST00000157838 343 ntBASIC12.94□□□□□ -0.34
Satb1Q60611 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Satb1Q60611 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Satb1Q60611 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.94□□□□□ -0.34
Satb1Q60611 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.94□□□□□ -0.34
Satb1Q60611 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.94□□□□□ -0.34
Satb1Q60611 Gm45224-201ENSMUST00000208203 414 ntBASIC12.94□□□□□ -0.34
Satb1Q60611 Gm5904-201ENSMUST00000210286 865 ntBASIC12.94□□□□□ -0.34
Satb1Q60611 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms