Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn2bQ56A07 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Scn2bQ56A07 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.29□□□□□ -0.44
Scn2bQ56A07 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.29□□□□□ -0.44
Scn2bQ56A07 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Gm1335-201ENSMUST00000121653 386 ntBASIC12.29□□□□□ -0.44
Scn2bQ56A07 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn2bQ56A07 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.29□□□□□ -0.44
Scn2bQ56A07 Gm10268-201ENSMUST00000085340 555 ntBASIC12.29□□□□□ -0.44
Scn2bQ56A07 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.29□□□□□ -0.44
Scn2bQ56A07 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn2bQ56A07 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.28□□□□□ -0.44
Scn2bQ56A07 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn2bQ56A07 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.28□□□□□ -0.44
Scn2bQ56A07 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn2bQ56A07 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Gm14660-201ENSMUST00000119809 575 ntBASIC12.28□□□□□ -0.44
Scn2bQ56A07 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Scn2bQ56A07 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.28□□□□□ -0.44
Scn2bQ56A07 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Gm7029-201ENSMUST00000173226 450 ntBASIC12.28□□□□□ -0.44
Scn2bQ56A07 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn2bQ56A07 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Scn2bQ56A07 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Scn2bQ56A07 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Scn2bQ56A07 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn2bQ56A07 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Scn2bQ56A07 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Scn2bQ56A07 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.27□□□□□ -0.44
Scn2bQ56A07 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Scn2bQ56A07 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.27□□□□□ -0.44
Scn2bQ56A07 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Scn2bQ56A07 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms