Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rc3h1Q4VGL6 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 AC154849.3-201ENSMUST00000223733 1660 ntBASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Mir6927-201ENSMUST00000184494 71 ntBASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Gm28450-201ENSMUST00000187349 638 ntBASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 AC159205.5-202ENSMUST00000224849 386 ntBASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rc3h1Q4VGL6 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Mir5120-201ENSMUST00000175020 78 ntBASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Gm25732-201ENSMUST00000175168 60 ntBASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Gm9230-201ENSMUST00000188228 532 ntBASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.35□□□□□ -0.11
Rc3h1Q4VGL6 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 B9d1os-201ENSMUST00000137010 674 ntBASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.34□□□□□ -0.11
Rc3h1Q4VGL6 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms